C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11824
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120191 Gm11824-001 ENSMUSG00000082128 10090 + 4:14170066-14170911 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120191
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120191 2.486±0.39 0.047±0.02 1.017±0.97 1.850±0.42 0.924±0.62 0.493±0.19 0.633±0.43 0.779±1.89 0.683±0.15 0.098±0.02 4.801±2.62 0.020±0.00 0.237±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008R4 CIL_0008R4_0002 VISTA 4:13724600-14326426
CIL_0008MV CIL_0008MV_0002 VISTA 4:13972132-14578417

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301821 RPSA-001 protein_coding Homo_sapiens 0 974
ENST00000354585 RPSAP58-201 protein_coding Homo_sapiens 0 968
ENST00000401872 RP11-506B6.3-001 processed_pseudogene Homo_sapiens 0 798
ENST00000406712 RP3-334F4.1-001 processed_pseudogene Homo_sapiens 0 704
ENST00000412013 RPSAP63-001 processed_pseudogene Homo_sapiens 0 857
ENST00000412542 RP6-105D16.1-001 processed_pseudogene Homo_sapiens 0 859
ENST00000412645 AC016739.1-001 processed_pseudogene Homo_sapiens 0 636
ENST00000414293 RP11-182B22.2-001 transcribed_processed_pseudogene Homo_sapiens 0 776
ENST00000415189 AL160471.6-001 processed_pseudogene Homo_sapiens 0 675
ENST00000416648 RPSAP31-001 transcribed_processed_pseudogene Homo_sapiens 0 774
ENST00000417882 RPSAP6-001 processed_pseudogene Homo_sapiens 0 719
ENST00000418207 RPSAP9-001 processed_pseudogene Homo_sapiens 0 924
ENST00000421048 RP4-635G19.1-001 processed_pseudogene Homo_sapiens 0 420
ENST00000427417 COMMD1-005 protein_coding Homo_sapiens 0 656
ENST00000428316 RP4-747G18.5-001 processed_pseudogene Homo_sapiens 0 859
ENST00000429143 RPSAP14-001 processed_pseudogene Homo_sapiens 0 372
ENST00000429844 RPSAP8-001 processed_pseudogene Homo_sapiens 0 867
ENST00000431241 RP11-556K13.1-001 processed_pseudogene Homo_sapiens 0 952
ENST00000432681 RPSAP32-001 processed_pseudogene Homo_sapiens 0 387
ENST00000433498 RPSAP53-001 processed_pseudogene Homo_sapiens 0 760
ENST00000435879 RP11-254B13.1-001 processed_pseudogene Homo_sapiens 0 929
ENST00000437188 AC074008.1-001 processed_pseudogene Homo_sapiens 0 680
ENST00000437336 RP11-350G8.3-001 processed_pseudogene Homo_sapiens 0 902
ENST00000442699 AC018462.3-001 processed_pseudogene Homo_sapiens 0 846
ENST00000443003 RPSA-002 protein_coding Homo_sapiens 0 920
ENST00000443010 AC097639.8-001 processed_pseudogene Homo_sapiens 0 867
ENST00000444166 COMMD1-008 protein_coding Homo_sapiens 0 597
ENST00000444599 RP11-366O20.5-001 processed_pseudogene Homo_sapiens 0 750
ENST00000445165 RPSAP31-002 processed_transcript Homo_sapiens 0 351
ENST00000446095 RPSAP23-001 processed_pseudogene Homo_sapiens 0 647
ENST00000447583 RP11-533E19.3-001 processed_pseudogene Homo_sapiens 0 592
ENST00000448168 RPSAP15-001 processed_pseudogene Homo_sapiens 0 957
ENST00000453374 RP11-179G5.1-001 processed_pseudogene Homo_sapiens 0 902
ENST00000456555 AC011322.1-001 transcribed_processed_pseudogene Homo_sapiens 0 826
ENST00000456871 RP11-398C13.2-001 processed_pseudogene Homo_sapiens 0 730
ENST00000458337 COMMD1-006 protein_coding Homo_sapiens 0 592
ENST00000458478 RPSA-008 protein_coding Homo_sapiens 0 891
ENST00000464073 RP11-187O7.1-001 transcribed_processed_pseudogene Homo_sapiens 0 928
ENST00000465940 RP11-58H15.1-001 transcribed_processed_pseudogene Homo_sapiens 0 734
ENST00000467439 RP11-162K6.1-001 processed_pseudogene Homo_sapiens 0 767
ENST00000477347 RPSAP55-001 processed_pseudogene Homo_sapiens 0 835
ENST00000478027 RPSA-003 processed_transcript Homo_sapiens 0 857
ENST00000479228 RPSAP47-001 processed_pseudogene Homo_sapiens 0 924
ENST00000483479 RP11-179A18.1-001 processed_pseudogene Homo_sapiens 0 811
ENST00000484897 RPSAP56-001 processed_pseudogene Homo_sapiens 0 852
ENST00000485258 RP11-600F24.1-001 processed_pseudogene Homo_sapiens 0 824
ENST00000488229 RPSAP4-001 processed_pseudogene Homo_sapiens 0 896
ENST00000489520 RPSAP52-002 processed_transcript Homo_sapiens 0 739
ENST00000493929 RPSAP52-001 transcribed_processed_pseudogene Homo_sapiens 0 739
ENST00000494591 RP11-58H15.1-002 processed_transcript Homo_sapiens 0 734
ENST00000496398 RPSAP58-001 protein_coding Homo_sapiens 0 968
ENST00000522496 RP11-117L6.1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000590033 RPSAP57-001 processed_pseudogene Homo_sapiens 0 436
ENST00000625020 bP-2168N6.2-001 processed_pseudogene Homo_sapiens 0 344

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