C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008R0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs985 VISTA 9606 6:97634586-98236053
GeneTranscriptPositionBiotype
ENSG00000220505 (EIF4EBP2P3)
eukaryotic translation initiation factor 4E binding protein 2 pseudogene 3 		ENST00000403144 (EIF4EBP2P3-001) 98179499-98179832 processed_pseudogene
ENSG00000224849 (RP1-104O17.1)
 ENST00000433637 (RP1-104O17.1-001) 97702281-97708103 lincRNA
ENSG00000226207 (RP1-104O17.3)
 ENST00000432438 (RP1-104O17.3-001) 97710953-97717197 lincRNA
ENSG00000236920 (RP11-111D3.2)
 ENST00000418652 (RP11-111D3.2-001) 98210020-98214683 lincRNA
ENSG00000271860 (RP11-436D23.1)
 ENST00000606913 (RP11-436D23.1-001) 97885501-98398863 lincRNA
ENST00000607032 (RP11-436D23.1-002) 97938789-98398771 lincRNA
ENST00000607823 (RP11-436D23.1-003) 97816709-98399872 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0008R0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs985 VISTA 10090 4:23413405-24014930
GeneTranscriptPositionBiotype
ENSMUSG00000081997 (Gm11886)
predicted gene 11886 		ENSMUST00000121518 (Gm11886-001) 23422513-23422815 processed_pseudogene
ENSMUSG00000082876 (Gm11889)
predicted gene 11889 		ENSMUST00000118402 (Gm11889-001) 23517362-23518440 processed_pseudogene
ENSMUSG00000083727 (Gm11887)
predicted gene 11887 		ENSMUST00000119637 (Gm11887-001) 23440018-23440247 processed_pseudogene
ENSMUSG00000083785 (Gm11888)
predicted gene 11888 		ENSMUST00000120471 (Gm11888-001) 23484820-23486020 processed_pseudogene
ENSMUSG00000084179 (Gm11890)
predicted gene 11890 		ENSMUST00000119585 (Gm11890-001) 23659928-23660344 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Genes
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008R0_0001ENSG00000220505ENST00000403144ENSG00000224849ENST00000433637ENSG00000226207ENST00000432438ENSG00000236920ENST00000418652ENSG00000271860ENST00000606913ENST00000607032ENST00000607823CIL_0008R0_0002ENSMUSG00000081997ENSMUST00000121518ENSMUSG00000082876ENSMUST00000118402ENSMUSG00000083727ENSMUST00000119637ENSMUSG00000083785ENSMUST00000120471ENSMUSG00000084179ENSMUST00000119585
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008R0_0001ENSG00000220505ENST00000403144ENSG00000224849ENST00000433637ENSG00000226207ENST00000432438ENSG00000236920ENST00000418652ENSG00000271860ENST00000606913ENST00000607032ENST00000607823CIL_0008R0_0002ENSMUSG00000081997ENSMUST00000121518ENSMUSG00000082876ENSMUST00000118402ENSMUSG00000083727ENSMUST00000119637ENSMUSG00000083785ENSMUST00000120471ENSMUSG00000084179ENSMUST00000119585
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000220505 ENST00000403144 N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224849 ENST00000433637 N/A N/A 0.353±0.00 N/A N/A N/A N/A 0.309±0.00 1.257±0.00 N/A N/A N/A 0.018±0.00
ENSG00000226207 ENST00000432438 N/A N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00
ENSG00000236920 ENST00000418652 N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271860 ENST00000606913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 0.059±0.00
ENST00000607032 N/A N/A 0.485±0.00 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
ENST00000607823 N/A N/A 0.179±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000081997 ENSMUST00000121518 0.951±0.00 0.143±0.02 1.110±1.04 0.566±0.26 0.478±0.00 0.517±0.12 0.355±0.18 0.199±0.18 0.471±0.21 N/A 1.971±0.84 0.804±0.94 0.333±0.11
ENSMUSG00000082876 ENSMUST00000118402 0.059±0.00 0.007±0.00 0.118±0.00 N/A N/A 0.124±0.00 0.045±0.00 0.082±0.12 N/A 0.037±0.00 0.174±0.18 0.073±0.04 0.888±0.72
ENSMUSG00000083727 ENSMUST00000119637 N/A N/A 0.476±0.11 1.805±0.59 1.110±0.00 0.553±0.00 N/A 0.100±0.05 0.804±0.10 N/A 2.423±1.37 0.113±0.03 0.675±0.00
ENSMUSG00000083785 ENSMUST00000120471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00
ENSMUSG00000084179 ENSMUST00000119585 N/A N/A 0.219±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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