C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 11888
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120471 Gm11888-001 ENSMUSG00000083785 10090 + 4:23484820-23486020 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000120471
Transcript ID Testis
ENSMUST00000120471 0.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MX CIL_0007MX_0004 UCNEbase 4:22803646-24698662
CIL_00093Q CIL_00093Q_0002 VISTA 4:23041020-23641756
CIL_00095X CIL_00095X_0002 VISTA 4:23204397-23805743
CIL_0008N8 CIL_0008N8_0002 VISTA 4:23290042-23892039
CIL_0007TE CIL_0007TE_0002 VISTA 4:23301771-23903172
CIL_0008KG CIL_0008KG_0002 VISTA 4:23336061-23937408
CIL_0008R0 CIL_0008R0_0002 VISTA 4:23413405-24014930
CIL_00093T CIL_00093T_0002 VISTA 4:23431836-24033244

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000447420 RP4-803A2.2-001 unprocessed_pseudogene Homo_sapiens 0 281
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 189
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 331
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 353
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 324

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