C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008T9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1541 VISTA 9606 2:210499847-211101751
GeneTranscriptPositionBiotype
ENSG00000021826 (CPS1)
carbamoyl-phosphate synthase 1, mitochondrial 		ENST00000233072 (CPS1-001) 210556538-210679107 protein_coding
ENST00000417946 (CPS1-002) 210477682-210576474 protein_coding
ENST00000430249 (CPS1-011) 210477709-210679107 protein_coding
ENST00000451903 (CPS1-003) 210593366-210679107 protein_coding
ENST00000467353 (CPS1-006) 210604965-210606771 retained_intron
ENST00000470791 (CPS1-008) 210658383-210663146 retained_intron
ENST00000479988 (CPS1-004) 210671615-210679107 retained_intron
ENST00000497121 (CPS1-007) 210631228-210647934 processed_transcript
ENST00000497163 (CPS1-005) 210577155-210579800 retained_intron
ENST00000518043 (CPS1-010) 210477682-210576474 protein_coding
ENST00000523702 (CPS1-009) 210477690-210577493 protein_coding
ENST00000619804 (CPS1-201) 210556734-210599555 protein_coding
CIL_0008T9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1541 VISTA 10090 1:67065819-67667727
GeneTranscriptPositionBiotype
ENSMUSG00000025991 (Cps1)
carbamoyl-phosphate synthetase 1 		ENSMUST00000027144 (Cps1-001) 67123026-67231259 protein_coding
ENSMUSG00000086204 (Gm15668)
predicted gene 15668 		ENSMUST00000140506 (Gm15668-001) 67249200-67323609 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008T9_0001ENSG00000021826ENST00000233072ENST00000417946ENST00000430249ENST00000451903ENST00000467353ENST00000470791ENST00000479988ENST00000497121ENST00000497163ENST00000518043ENST00000523702ENST00000619804CIL_0008T9_0002ENSMUSG00000025991ENSMUST00000027144ENSMUSG00000086204ENSMUST00000140506
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008T9_0001ENSG00000021826ENST00000233072ENST00000417946ENST00000430249ENST00000451903ENST00000479988ENST00000619804CIL_0008T9_0002ENSMUSG00000025991ENSMUST00000027144ENSMUSG00000086204ENSMUST00000140506
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000021826 ENST00000233072 N/A N/A N/A 0.165±0.04 1.392±0.00 N/A N/A 382.814±0.00 N/A N/A N/A N/A 0.204±0.03 N/A
ENST00000417946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A
ENST00000430249 0.381±0.00 0.062±0.00 0.285±0.00 0.379±0.00 0.341±0.00 0.095±0.00 0.156±0.11 30.408±29.81 83.066±0.00 0.194±0.09 0.076±0.00 0.353±0.20 0.133±0.00 0.876±0.02
ENST00000451903 N/A 0.193±0.00 N/A N/A N/A 0.239±0.00 0.350±0.00 N/A N/A N/A 0.082±0.05 N/A N/A 3.905±0.08
ENST00000467353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479988 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A 0.029±0.00 N/A N/A
ENST00000497121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619804 N/A N/A 0.537±0.00 1.994±0.00 0.822±0.29 0.680±0.00 0.404±0.00 284.413±0.00 0.620±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025991 ENSMUST00000027144 0.074±0.06 0.142±0.02 0.015±0.01 0.044±0.02 1.081±0.11 0.717±0.23 0.066±0.06 0.019±0.01 310.381±264.09 0.117±0.07 0.026±0.02 0.198±0.21 0.165±0.12 0.144±0.04
ENSMUSG00000086204 ENSMUST00000140506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A

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