C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0008TQ_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs588 | VISTA | 9606 | X:140292334-140893238  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000134595  (SOX3)SRY (sex determining region Y)-box 3 |
ENST00000370536 (SOX3-001)
|
140502987-140505503 | protein_coding | |
|
ENSG00000184258 (CDR1) cerebellar degeneration-related protein 1, 34kDa |
ENST00000370532 (CDR1-001)
|
140782405-140784871 | protein_coding | |
|
ENSG00000203930 (LINC00632) long intergenic non-protein coding RNA 632 |
ENST00000370535 (LINC00632-002)
|
140709767-140714822 | lincRNA | |
|
ENST00000498732 (LINC00632-001)
|
140709780-140772674 | lincRNA | ||
|
ENST00000602535 (LINC00632-004)
|
140764578-140772679 | lincRNA | ||
|
ENST00000602830 (LINC00632-003)
|
140716046-140772343 | lincRNA | ||
|
ENST00000607004 (LINC00632-005)
|
140709767-140712229 | lincRNA | ||
|
ENSG00000224942 (RP11-51C14.1) |
ENST00000420490 (RP11-51C14.1-001)
|
140397062-140398311 | processed_pseudogene | |
|
ENSG00000225758 (RPS17P17) ribosomal protein S17 pseudogene 17 |
ENST00000419392 (RPS17P17-001)
|
140470866-140471274 | processed_pseudogene | |
|
ENSG00000230668 (XXyac-YR29IB3.1) |
ENST00000455153 (XXyac-YR29IB3.1-001)
|
140681106-140687705 | lincRNA | |
|
ENSG00000263377 (AL121875.1) |
ENST00000584172 (AL121875.1-201)
|
140404099-140404190 | miRNA | |
| CIL_0008TQ_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs588 | VISTA | 10090 | X:60694057-61294970 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000045179 (Sox3) SRY (sex determining region Y)-box 3 |
ENSMUST00000135107 (Sox3-001)
|
60891366-60893430 | protein_coding | |
|
ENSMUSG00000067835 (Gm14661) predicted gene 14661 |
ENSMUST00000152669 (Gm14661-001)
|
60557728-60807993 | antisense | |
|
ENSMUSG00000071753 (C230004F18Rik) RIKEN cDNA C230004F18 gene |
ENSMUST00000096426 (C230004F18Rik-201)
|
61116398-61175991 | processed_transcript | |
|
ENSMUST00000125930 (C230004F18Rik-002)
|
61116386-61139460 | processed_transcript | ||
|
ENSMUST00000137153 (C230004F18Rik-003)
|
61116386-61120651 | processed_transcript | ||
|
ENSMUST00000140023 (C230004F18Rik-004)
|
61116386-61134796 | processed_transcript | ||
|
ENSMUST00000144853 (C230004F18Rik-001)
|
61116386-61175991 | processed_transcript | ||
|
ENSMUSG00000081323 (Rpl7l1-ps1) ribosomal protein L7-like 1, pseudogene 1 |
ENSMUST00000118822 (Rpl7l1-ps1-001)
|
60971990-60972714 | processed_pseudogene | |
|
ENSMUSG00000081891 (Gm14660) predicted gene 14660 |
ENSMUST00000119809 (Gm14660-001)
|
60818208-60818782 | processed_pseudogene | |
|
ENSMUSG00000083463 (Gm4909) predicted gene 4909 |
ENSMUST00000118749 (Gm4909-001)
|
60706270-60707063 | processed_pseudogene | |
|
ENSMUSG00000083543 (Gm14663) predicted gene 14663 |
ENSMUST00000118474 (Gm14663-001)
|
61090582-61091734 | processed_pseudogene | |
|
ENSMUSG00000084331 (Gm8163) predicted gene 8163 |
ENSMUST00000122020 (Gm8163-001)
|
60726389-60727448 | processed_pseudogene | |
|
ENSMUSG00000087401 (Gm14664) predicted gene 14664 |
ENSMUST00000142919 (Gm14664-001)
|
61041741-61076068 | lincRNA | |
|
ENSMUSG00000087565 (Gm14662) predicted gene 14662 |
ENSMUST00000145552 (Gm14662-001)
|
60893653-60898067 | antisense | |
|
ENSMUSG00000090546 (Cdr1) cerebellar degeneration related antigen 1 |
ENSMUST00000166381 (Cdr1-201)
|
61183246-61185558 | protein_coding | |
Expression Patterns
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