C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008VZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1612 VISTA 9606 16:73491294-74094667
GeneTranscriptPositionBiotype
ENSG00000225178 (RPSAP56)
ribosomal protein SA pseudogene 56
ENST00000484897 (RPSAP56-001) 73940639-73941524 processed_pseudogene
ENSG00000259817 (RP11-53L24.1)
ENST00000565061 (RP11-53L24.1-001) 73812621-73816054 lincRNA
ENSG00000259971 (RP11-44L9.3)
ENST00000564291 (RP11-44L9.3-001) 73511176-73511654 lincRNA
ENSG00000260687 (RP11-44L9.2)
ENST00000562748 (RP11-44L9.2-001) 73499309-73499763 lincRNA
ENSG00000260848 (CTD-2009A10.1)
ENST00000567227 (CTD-2009A10.1-001) 73543941-73558522 lincRNA
ENSG00000261404 (AC009120.4)
ENST00000562888 (AC009120.4-003) 74206095-74296762 lincRNA
ENST00000568137 (AC009120.4-001) 74192392-74215521 lincRNA
ENST00000569389 (AC009120.4-002) 74054151-74296751 lincRNA
ENSG00000279420 (RP11-42H13.1)
ENST00000624202 (RP11-42H13.1-001) 74053365-74053965 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0008VZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1612 VISTA 10090 8:107725350-108329327
GeneTranscriptPositionBiotype
ENSMUSG00000094718 (Gm22825)
predicted gene, 22825
ENSMUST00000179444 (Gm22825-201) 107842451-107842551 miRNA
ENSMUSG00000095727 (Gm23646)
predicted gene, 23646
ENSMUST00000178119 (Gm23646-201) 107840957-107841057 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008VZ_0001ENSG00000225178ENST00000484897ENSG00000259817ENST00000565061ENSG00000259971ENST00000564291ENSG00000260687ENST00000562748ENSG00000260848ENST00000567227ENSG00000261404ENST00000562888ENST00000568137ENST00000569389ENSG00000279420ENST00000624202CIL_0008VZ_0002ENSMUSG00000094718ENSMUST00000179444ENSMUSG00000095727ENSMUST00000178119
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008VZ_0001ENSG00000225178ENST00000484897ENSG00000259817ENST00000565061ENSG00000259971ENST00000564291ENSG00000260687ENST00000562748ENSG00000260848ENST00000567227ENSG00000261404ENST00000562888ENST00000568137ENST00000569389ENSG00000279420ENST00000624202CIL_0008VZ_0002ENSMUSG00000094718ENSMUST00000179444ENSMUSG00000095727ENSMUST00000178119
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000225178 ENST00000484897 0.258±0.00 1.021±0.00 0.258±0.00 0.227±0.00 0.859±0.00 0.053±0.00 1.193±0.00 0.294±0.00 0.910±0.00 0.215±0.00 0.046±0.00 N/A 0.732±0.00
ENSG00000259817 ENST00000565061 N/A 0.046±0.00 0.194±0.00 0.141±0.00 N/A N/A 0.093±0.00 0.118±0.00 0.128±0.00 N/A N/A 0.109±0.00 0.526±0.41
ENSG00000259971 ENST00000564291 N/A N/A N/A N/A N/A N/A N/A N/A 0.660±0.00 N/A N/A N/A N/A
ENSG00000260687 ENST00000562748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00
ENSG00000260848 ENST00000567227 N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A 0.043±0.00
ENSG00000261404 ENST00000562888 N/A N/A 0.320±0.23 0.048±0.00 N/A N/A N/A N/A 0.477±0.00 N/A 0.130±0.00 0.345±0.00 N/A
ENST00000568137 N/A 0.031±0.00 N/A 0.047±0.00 0.029±0.00 0.070±0.00 0.046±0.00 N/A N/A N/A 0.050±0.00 0.031±0.00 1.197±0.07
ENST00000569389 N/A N/A 0.122±0.00 N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000279420 ENST00000624202 N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.382±0.13
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000094718 ENSMUST00000179444 N/A N/A 13.407±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095727 ENSMUST00000178119 N/A N/A 13.407±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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