C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008XM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs872 VISTA 9606 11:121629063-122230463
GeneTranscriptPositionBiotype
ENSG00000137642 (SORL1)
sortilin-related receptor, L(DLR class) A repeats containing 		ENST00000260197 (SORL1-001) 121452203-121633693 protein_coding
ENST00000524633 (SORL1-011) 121614286-121622269 retained_intron
ENST00000524873 (SORL1-008) 121557015-121558773 retained_intron
ENST00000525532 (SORL1-003) 121566725-121629684 protein_coding
ENST00000527649 (SORL1-012) 121626201-121629693 retained_intron
ENST00000527934 (SORL1-006) 121590419-121629684 protein_coding
ENST00000528339 (SORL1-009) 121608200-121621240 retained_intron
ENST00000529445 (SORL1-007) 121555042-121558837 retained_intron
ENST00000530365 (SORL1-013) 121628836-121632240 retained_intron
ENST00000532451 (SORL1-002) 121452380-121547024 processed_transcript
ENST00000532694 (SORL1-004) 121576760-121629691 protein_coding
ENST00000534286 (SORL1-005) 121576838-121629678 protein_coding
ENST00000534754 (SORL1-010) 121611252-121621234 retained_intron
ENSG00000255090 (RP11-820L6.1)
 ENST00000526674 (RP11-820L6.1-009) 122292274-122422871 lincRNA
ENST00000527474 (RP11-820L6.1-001) 122180338-122367973 lincRNA
ENST00000528381 (RP11-820L6.1-007) 122234262-122367815 lincRNA
ENST00000529733 (RP11-820L6.1-008) 122203509-122367872 lincRNA
ENST00000529804 (RP11-820L6.1-006) 122202764-122309451 lincRNA
ENST00000532350 (RP11-820L6.1-002) 122155422-122203062 lincRNA
ENST00000533109 (RP11-820L6.1-003) 122155551-122180400 lincRNA
ENST00000534782 (RP11-820L6.1-004) 122155551-122203062 lincRNA
ENSG00000255248 (RP11-166D19.1)
 ENST00000524376 (RP11-166D19.1-003) 122089110-122100447 sense_overlapping
ENST00000528986 (RP11-166D19.1-002) 122089110-122101029 sense_overlapping
ENST00000529823 (RP11-166D19.1-001) 122089106-122102166 sense_overlapping
ENST00000530072 (RP11-166D19.1-013) 122100678-122101686 sense_overlapping
ENST00000530955 (RP11-166D19.1-017) 122028355-122101702 sense_overlapping
ENST00000531071 (RP11-166D19.1-011) 122091055-122101697 sense_overlapping
ENST00000531381 (RP11-166D19.1-004) 122089103-122102178 sense_overlapping
ENST00000531470 (RP11-166D19.1-016) 122066336-122070156 sense_overlapping
ENST00000531629 (RP11-166D19.1-014) 122100909-122101686 sense_overlapping
ENST00000532315 (RP11-166D19.1-009) 122091417-122105942 sense_overlapping
ENST00000532319 (RP11-166D19.1-015) 122065560-122100448 sense_overlapping
ENST00000532890 (RP11-166D19.1-012) 122091285-122101686 sense_overlapping
ENST00000534195 (RP11-166D19.1-010) 122091254-122105169 sense_overlapping
ENST00000534297 (RP11-166D19.1-008) 122091545-122116323 sense_overlapping
ENSG00000259571 (BLID)
BH3-like motif containing, cell death inducer 		ENST00000560104 (BLID-001) 122115354-122116215 protein_coding
CIL_0008XM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs872 VISTA 10090 9:41435463-42036836
GeneTranscriptPositionBiotype
ENSMUSG00000049313 (Sorl1)
sortilin-related receptor, LDLR class A repeats-containing 		ENSMUST00000060989 (Sorl1-001) 41964720-42124297 protein_coding
ENSMUST00000134560 (Sorl1-004) 41969739-41974587 retained_intron
ENSMUST00000139133 (Sorl1-002) 41984508-41985834 processed_transcript
ENSMUST00000148800 (Sorl1-003) 41977562-41984570 retained_intron
ENSMUSG00000074415 (2610203C20Rik)
RIKEN cDNA 2610203C20 gene 		ENSMUST00000098868 (2610203C20Rik-201) 41580741-41592827 processed_transcript
ENSMUST00000180535 (2610203C20Rik-006) 41614237-41617772 retained_intron
ENSMUST00000180622 (2610203C20Rik-003) 41581253-41612763 lincRNA
ENSMUST00000180818 (2610203C20Rik-004) 41581267-41614989 lincRNA
ENSMUST00000181214 (2610203C20Rik-002) 41579974-41592829 lincRNA
ENSMUST00000181296 (2610203C20Rik-005) 41588494-41592737 retained_intron
ENSMUST00000181814 (2610203C20Rik-007) 41474937-41615185 lincRNA
ENSMUST00000181955 (2610203C20Rik-001) 41581339-41592487 lincRNA
ENSMUST00000187345 (2610203C20Rik-012) 41376526-41488426 lincRNA
ENSMUST00000188277 (2610203C20Rik-010) 41474829-41590476 lincRNA
ENSMUST00000188412 (2610203C20Rik-008) 41600272-41612729 lincRNA
ENSMUST00000188774 (2610203C20Rik-009) 41579494-41592826 lincRNA
ENSMUST00000188945 (2610203C20Rik-011) 41376397-41590019 lincRNA
ENSMUST00000190109 (2610203C20Rik-013) 41376561-41432079 lincRNA
ENSMUSG00000098093 (Gm8707)
predicted gene 8707 		ENSMUST00000183325 (Gm8707-001) 41654303-41655282 processed_pseudogene
ENSMUSG00000100158 (RP23-442M18.3)
predicted gene 28119 		ENSMUST00000185538 (RP23-442M18.3-001) 41581908-41582283 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008XM_0001ENSG00000137642ENST00000260197ENST00000525532ENST00000532451ENSG00000255090ENST00000526674ENST00000527474ENST00000528381ENST00000529733ENST00000529804ENST00000532350ENST00000533109ENST00000534782ENSG00000255248ENST00000524376ENST00000528986ENST00000529823ENST00000530072ENST00000530955ENST00000531071ENST00000531381ENST00000531629ENST00000532315ENST00000532319ENSG00000259571ENST00000560104CIL_0008XM_0002ENSMUSG00000049313ENSMUST00000060989ENSMUSG00000074415ENSMUST00000098868ENSMUST00000181214ENSMUST00000181296ENSMUST00000181814ENSMUST00000181955ENSMUST00000188277ENSMUST00000188774ENSMUSG00000098093ENSMUST00000183325ENSMUSG00000100158ENSMUST00000185538
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137642 ENST00000260197 0.444±0.00 1.537±0.00 4.365±0.00 15.993±4.64 1.636±0.96 2.591±2.19 0.381±0.13 13.744±9.24 4.862±2.70 4.383±0.96 0.016±0.00 3.119±2.18 0.555±0.05 1.602±0.80
ENST00000524633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.318±0.00 N/A N/A N/A
ENST00000527649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532451 N/A N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A N/A 0.185±0.00 N/A N/A N/A
ENST00000532694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255090 ENST00000526674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.751±0.00 N/A 0.199±0.00 N/A
ENST00000527474 N/A N/A N/A N/A 0.373±0.00 N/A 0.209±0.00 0.399±0.00 0.042±0.00 N/A N/A N/A 0.083±0.04 N/A
ENST00000528381 N/A N/A 1.457±0.00 N/A N/A N/A 0.059±0.00 1.126±0.79 N/A N/A 0.184±0.00 0.302±0.20 1.779±0.00 0.501±0.00
ENST00000529733 0.769±0.00 0.790±0.00 N/A 1.150±0.00 0.875±0.00 1.000±0.34 N/A N/A 0.224±0.00 1.449±0.00 N/A 1.383±0.00 2.174±0.00 1.672±0.54
ENST00000529804 N/A N/A N/A 1.629±0.00 N/A N/A 0.152±0.00 N/A N/A 1.353±0.16 N/A N/A N/A N/A
ENST00000532350 N/A 0.256±0.00 N/A 2.311±0.00 0.558±0.00 N/A 0.260±0.00 N/A N/A N/A N/A 5.112±0.00 N/A N/A
ENST00000533109 N/A N/A N/A N/A 2.141±0.00 N/A 0.419±0.00 N/A N/A N/A N/A 1.188±0.00 0.793±0.00 N/A
ENST00000534782 0.197±0.00 0.204±0.00 N/A 1.349±0.10 N/A 1.311±0.65 N/A 1.458±1.05 N/A N/A N/A 0.742±0.00 0.951±0.00 0.876±0.09
ENSG00000255248 ENST00000524376 3.446±0.00 2.179±0.00 N/A 4.768±2.40 5.604±0.83 8.156±6.79 2.971±0.82 1.448±0.00 0.124±0.00 6.721±4.42 0.873±0.00 8.522±7.37 0.883±0.44 3.617±0.06
ENST00000528986 0.939±0.00 N/A 0.785±0.00 N/A 1.086±0.00 1.775±0.00 N/A N/A 2.878±0.00 1.869±0.98 0.169±0.00 5.034±2.89 0.104±0.00 1.287±0.00
ENST00000529823 0.617±0.00 N/A N/A N/A N/A N/A 0.668±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000530072 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.605±0.00 N/A N/A N/A N/A
ENST00000530955 N/A N/A N/A 9.297±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531071 N/A N/A N/A N/A N/A N/A 1.975±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000531381 N/A N/A N/A N/A N/A N/A 1.058±0.00 N/A N/A N/A 0.127±0.00 N/A 0.100±0.00 N/A
ENST00000531470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.905±0.00 N/A
ENST00000532315 N/A N/A 0.460±0.00 N/A N/A N/A N/A 0.263±0.00 N/A N/A N/A N/A N/A N/A
ENST00000532319 N/A N/A N/A 4.065±0.00 N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A
ENST00000532890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259571 ENST00000560104 N/A N/A 1.214±0.00 N/A N/A N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049313 ENSMUST00000060989 11.170±3.91 5.415±0.29 14.300±0.16 12.561±12.05 20.389±4.20 18.580±0.56 1.315±0.46 14.293±4.07 0.577±0.45 19.531±6.17 3.025±0.76 5.715±1.23 1.316±1.03 0.623±0.31
ENSMUST00000134560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074415 ENSMUST00000098868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A
ENSMUST00000180535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181214 N/A N/A N/A 2.248±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00
ENSMUST00000181296 12.379±2.77 4.532±0.74 19.890±1.86 65.860±45.82 8.810±2.18 3.414±0.79 4.151±0.12 1.140±0.22 0.934±0.76 6.825±1.61 1.085±0.19 21.781±10.60 1.403±1.19 1.205±0.58
ENSMUST00000181814 N/A N/A N/A 0.853±0.00 N/A N/A N/A N/A N/A N/A 0.490±0.12 N/A 0.266±0.22 N/A
ENSMUST00000181955 N/A N/A N/A 1.031±0.00 N/A 1.495±0.00 N/A N/A N/A N/A N/A 2.045±0.00 N/A 0.058±0.00
ENSMUST00000187345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188277 N/A N/A N/A N/A N/A N/A N/A N/A 0.324±0.03 N/A N/A N/A N/A N/A
ENSMUST00000188412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188774 N/A N/A N/A N/A N/A N/A N/A 0.215±0.00 0.067±0.00 N/A N/A N/A N/A N/A
ENSMUST00000188945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098093 ENSMUST00000183325 0.585±0.15 0.379±0.16 0.677±0.01 2.524±0.00 0.571±0.17 0.175±0.09 0.991±0.28 0.176±0.07 0.030±0.01 0.420±0.21 0.358±0.08 0.568±0.40 0.016±0.01 0.180±0.03
ENSMUSG00000100158 ENSMUST00000185538 0.749±0.00 N/A 2.721±0.00 N/A 0.595±0.22 0.818±0.00 N/A N/A 0.067±0.01 N/A 0.344±0.08 2.309±0.09 0.338±0.03 N/A

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