C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paired-like homeobox 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000002384 phox2a-001 ENSDARG00000007406 7955 + 15:46428557-46437328 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000002384
Transcript ID Brain Heart Kidney Muscle
ENSDART00000002384 1.057±0.55 0.089±0.03 0.251±0.10 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000300 CIL_000300_0001 CGP 15:46428557-46456769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007420 IGI brain development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329255 ALX4-001 protein_coding Homo_sapiens 2e-21 110

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