C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: muscle segment homeobox D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000003441 msxd-201 ENSDARG00000006982 7955 + 21:40051375-40054278 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000003441
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000003441 0.435±0.29 0.545±0.42 0.296±0.12 0.032±0.00 0.177±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325017 NKX2-6-001 protein_coding Homo_sapiens 0.00002 55

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