C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 7 (cationic amino acid transporter, y+ system), member 8a (slc7a8a), mRNA
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000010124 SLC7A8B-201 ENSDARG00000075831 7955 - 7:25377178-25402677 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000010124
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000010124 35.179±10.67 7.371±0.71 20.134±0.17 0.245±0.00 42.362±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0006810 IEA transport
GO:0006865 IEA amino acid transport
GO:0015171 IEA amino acid transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022787 Slc7a8-201 protein_coding Mus_musculus 0 961
ENST00000316902 SLC7A8-001 protein_coding Homo_sapiens 0 935
ENST00000339733 SLC7A8-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000397310 SLC7A8-008 retained_intron Homo_sapiens 0 263
ENST00000422941 SLC7A8-201 protein_coding Homo_sapiens 0 508
ENST00000453702 SLC7A8-002 protein_coding Homo_sapiens 0 599
ENST00000528186 SLC7A8-012 retained_intron Homo_sapiens 0 294
ENST00000528806 SLC7A8-013 retained_intron Homo_sapiens 0 289
ENST00000528860 SLC7A8-007 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000529705 SLC7A8-005 protein_coding Homo_sapiens 0 601
ENST00000617478 SLC7A8-202 protein_coding Homo_sapiens 0 922
ENST00000618208 SLC7A8-203 protein_coding Homo_sapiens 0 935
ENST00000621729 SLC7A8-204 protein_coding Homo_sapiens 0 819

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