C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022787 Slc7a8-201 ENSMUSG00000022180 10090 - 14:54722216-54781886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022787
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022787 17.223±9.06 22.508±4.48 4.724±2.71 3.214±1.10 4.911±1.50 3.172±1.53 0.980±0.05 70.534±35.82 1.639±0.67 1.624±0.04 3.871±0.93 38.861±14.05 27.546±16.87 7.464±4.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0009BW CIL_0009BW_0002 VISTA 14:54696106-55297707
CIL_0008Q4 CIL_0008Q4_0002 VISTA 14:54696894-55297224
CIL_0008QH CIL_0008QH_0002 VISTA 14:54703667-55304830
CIL_0006MX CIL_0006MX_0002 CGP 14:54710363-54781886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005275 ISA amine transmembrane transporter activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005886 ISA plasma membrane
GO:0006865 ISA amino acid transport
GO:0015101 IEA organic cation transmembrane transporter activity
GO:0015179 IDA L-amino acid transmembrane transporter activity
GO:0015695 IEA organic cation transport
GO:0015807 IDA L-amino acid transport
GO:0015837 ISA amine transport
GO:0016021 IEA integral component of membrane
GO:0019534 IEA toxin transporter activity
GO:0070062 IEA extracellular vesicular exosome
GO:1901998 IEA toxin transport
GO:1902475 IDA L-alpha-amino acid transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000010124 SLC7A8B-201 protein_coding Danio_rerio 0 961
ENST00000316902 SLC7A8-001 protein_coding Homo_sapiens 0 2006
ENST00000339733 SLC7A8-006 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000397310 SLC7A8-008 retained_intron Homo_sapiens 0 556
ENST00000422941 SLC7A8-201 protein_coding Homo_sapiens 0 1016
ENST00000453702 SLC7A8-002 protein_coding Homo_sapiens 0 1406
ENST00000469263 SLC7A8-004 protein_coding Homo_sapiens 0 989
ENST00000524758 SLC7A8-009 protein_coding Homo_sapiens 0 283
ENST00000525062 SLC7A8-010 protein_coding Homo_sapiens 0 226
ENST00000528186 SLC7A8-012 retained_intron Homo_sapiens 0 549
ENST00000528806 SLC7A8-013 retained_intron Homo_sapiens 0 538
ENST00000528860 SLC7A8-007 nonsense_mediated_decay Homo_sapiens 0 1016
ENST00000529705 SLC7A8-005 protein_coding Homo_sapiens 0 1408
ENST00000532568 SLC7A8-011 processed_transcript Homo_sapiens 0 553
ENST00000617478 SLC7A8-202 protein_coding Homo_sapiens 0 1993
ENST00000618208 SLC7A8-203 protein_coding Homo_sapiens 0 2004
ENST00000621729 SLC7A8-204 protein_coding Homo_sapiens 0 1772

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