C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000012903 wdr12-001 ENSDARG00000003287 7955 + 6:8080423-8096175 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000012903
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000012903 4.896±3.70 5.436±0.96 8.335±2.00 3.368±0.00 3.032±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000463 ISS maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 ISS maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 ISS nucleoplasm
GO:0005730 ISS nucleolus
GO:0006364 IEA rRNA processing
GO:0008283 ISS cell proliferation
GO:0030687 ISS preribosome, large subunit precursor
GO:0042254 IEA ribosome biogenesis
GO:0070545 ISS PeBoW complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027173 Wdr12-001 protein_coding Mus_musculus 0 501
ENSMUST00000117438 Wdr12-002 protein_coding Mus_musculus 0 501
ENSMUST00000122038 Wdr12-003 protein_coding Mus_musculus 0 501
ENSMUST00000122190 Gm4879-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000141417 Wdr12-005 protein_coding Mus_musculus 0 215
ENSMUST00000143342 Wdr12-004 protein_coding Mus_musculus 0 215

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