C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000024199 atp5a1-001 ENSDARG00000010149 7955 + 21:5320080-5331830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000024199
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000024199 171.458±133.12 599.739±575.11 50.893±27.92 73.643±0.00 664.563±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P6 CIL_0001P6_0001 CGP 21:5305848-5331830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0006754 IEA ATP biosynthetic process
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 IEA proton transport
GO:0016820 IEA hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0033178 IEA proton-transporting two-sector ATPase complex, catalytic domain
GO:0045261 IEA proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046034 IEA ATP metabolic process
GO:0046933 IEA proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026495 Atp5a1-001 protein_coding Mus_musculus 0 1243
ENSMUST00000114748 Atp5a1-002 protein_coding Mus_musculus 0 1230
ENSMUST00000146869 Atp5a1-005 retained_intron Mus_musculus 0 510
ENST00000282050 ATP5A1-201 protein_coding Homo_sapiens 0 1079
ENST00000398752 ATP5A1-001 protein_coding Homo_sapiens 0 1079
ENST00000586523 ATP5A1-013 retained_intron Homo_sapiens 0 220
ENST00000586592 ATP5A1-008 nonsense_mediated_decay Homo_sapiens 0 1074
ENST00000587902 ATP5A1-007 retained_intron Homo_sapiens 0 296
ENST00000590156 ATP5A1-002 nonsense_mediated_decay Homo_sapiens 0 1074
ENST00000590665 ATP5A1-009 protein_coding Homo_sapiens 0 896
ENST00000592364 ATP5A1-021 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000593152 ATP5A1-202 protein_coding Homo_sapiens 0 1074

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