C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026495 Atp5a1-001 ENSMUSG00000025428 10090 + 18:77773729-77782869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026495 271.426±28.32 179.404±34.84 341.311±72.08 227.311±29.55 257.621±47.95 288.820±44.09 1409.538±48.73 588.313±48.92 366.480±86.04 140.953±16.88 626.926±166.47 287.727±100.47 210.616±130.44 67.465±20.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P6 CIL_0001P6_0002 CGP 18:77757567-77782869

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001937 IEA negative regulation of endothelial cell proliferation
GO:0005515 IEA protein binding
GO:0005524 IMP ATP binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006629 IMP lipid metabolic process
GO:0008180 IEA COP9 signalosome
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0042288 IEA MHC class I protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0045261 IEA proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933 IMP proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000024199 atp5a1-001 protein_coding Danio_rerio 0 1243
ENST00000282050 ATP5A1-201 protein_coding Homo_sapiens 0 2089
ENST00000398752 ATP5A1-001 protein_coding Homo_sapiens 0 2178
ENST00000412323 ATP5A1P2-001 transcribed_processed_pseudogene Homo_sapiens 0 315
ENST00000423669 ATP5A1P8-001 processed_pseudogene Homo_sapiens 0 1275
ENST00000453978 ATP5A1P7-001 processed_pseudogene Homo_sapiens 0 1267
ENST00000454088 ATP5A1P6-001 processed_pseudogene Homo_sapiens 0 1258
ENST00000573189 ATP5A1P3-001 processed_pseudogene Homo_sapiens 0 1474
ENST00000586523 ATP5A1-013 retained_intron Homo_sapiens 0 348
ENST00000586592 ATP5A1-008 nonsense_mediated_decay Homo_sapiens 0 1997
ENST00000587902 ATP5A1-007 retained_intron Homo_sapiens 0 523
ENST00000589252 ATP5A1-018 protein_coding Homo_sapiens 0 501
ENST00000589611 ATP5A1-010 retained_intron Homo_sapiens 0 579
ENST00000589869 ATP5A1-003 protein_coding Homo_sapiens 0 771
ENST00000590156 ATP5A1-002 nonsense_mediated_decay Homo_sapiens 0 1919
ENST00000590324 ATP5A1-004 protein_coding Homo_sapiens 0 486
ENST00000590406 ATP5A1-005 protein_coding Homo_sapiens 0 695
ENST00000590665 ATP5A1-009 protein_coding Homo_sapiens 0 1530
ENST00000592364 ATP5A1-021 nonsense_mediated_decay Homo_sapiens 0 381
ENST00000593152 ATP5A1-202 protein_coding Homo_sapiens 0 1997
ENST00000616464 ATP5A1P2-002 processed_transcript Homo_sapiens 0 303
ENST00000622403 ATP5A1P10-001 processed_pseudogene Homo_sapiens 0 1266

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