C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ventral anterior homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000031490 vax1-001 ENSDARG00000021916 7955 - 17:21262708-21271479 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000031490
Transcript ID Brain Heart Kidney Muscle
ENSDART00000031490 2.900±0.63 0.045±0.00 0.433±0.00 0.176±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366903 HLX-001 protein_coding Homo_sapiens 0.00004 55
ENST00000369206 VAX1-001 protein_coding Homo_sapiens 0 265
ENST00000427693 HLX-002 protein_coding Homo_sapiens 0.00001 55
ENST00000549319 HLX-003 retained_intron Homo_sapiens 0.0001 55

Loading