C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: laminin, alpha 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000045126 lama5-001 ENSDARG00000058543 7955 - 23:9674223-9875589 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000045126
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000045126 0.610±0.20 2.179±1.15 2.349±1.06 0.082±0.00 0.914±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000691 CIL_000691_0001 CGP 23:9667880-9875589

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005515 IEA protein binding
GO:0005604 IEA basement membrane
GO:0005606 IEA laminin-1 complex
GO:0007155 IEA cell adhesion
GO:0008104 IMP protein localization
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0016337 IMP cell-cell adhesion
GO:0030155 IEA regulation of cell adhesion
GO:0030334 IEA regulation of cell migration
GO:0033333 IMP fin development
GO:0033334 IMP fin morphogenesis
GO:0035138 IMP pectoral fin morphogenesis
GO:0035141 IMP medial fin morphogenesis
GO:0045995 IEA regulation of embryonic development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015791 Lama5-001 protein_coding Mus_musculus 0 627

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