C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4, sodium bicarbonate cotransporter, member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000047416 SLC4A8-001 ENSDARG00000015531 7955 + 6:40285288-40336798 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000047416
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000047416 21.365±18.71 0.034±0.02 0.176±0.16 0.019±0.00 1.658±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005452 IEA inorganic anion exchanger activity
GO:0006810 IEA transport
GO:0006820 IEA anion transport
GO:0008509 IEA anion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295736 SLC4A7-001 protein_coding Homo_sapiens 0 337
ENST00000319957 SLC4A8-006 retained_intron Homo_sapiens 0 1022
ENST00000358657 SLC4A8-201 protein_coding Homo_sapiens 0 1009
ENST00000419036 SLC4A7-003 protein_coding Homo_sapiens 0 289
ENST00000425128 SLC4A7-201 protein_coding Homo_sapiens 0 337
ENST00000428179 SLC4A7-013 protein_coding Homo_sapiens 0 331
ENST00000428386 SLC4A7-002 protein_coding Homo_sapiens 0 337
ENST00000437179 SLC4A7-005 protein_coding Homo_sapiens 0 337
ENST00000437266 SLC4A7-007 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000438530 SLC4A7-009 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000440156 SLC4A7-006 protein_coding Homo_sapiens 0 337
ENST00000445684 SLC4A7-010 protein_coding Homo_sapiens 0 337
ENST00000446700 SLC4A7-011 protein_coding Homo_sapiens 0 337
ENST00000453097 SLC4A8-001 protein_coding Homo_sapiens 0 1022
ENST00000454389 SLC4A7-014 protein_coding Homo_sapiens 0 337
ENST00000455077 SLC4A7-004 protein_coding Homo_sapiens 0 337
ENST00000457377 SLC4A7-008 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000514353 SLC4A8-003 protein_coding Homo_sapiens 0 638
ENST00000535225 SLC4A8-016 protein_coding Homo_sapiens 0 640
ENST00000550211 SLC4A8-009 processed_transcript Homo_sapiens 1e-35 154
ENST00000551071 SLC4A8-007 retained_intron Homo_sapiens 0 998
ENST00000604314 SLC4A8-019 retained_intron Homo_sapiens 0 1007

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