C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000053125 sema3e-001 ENSDARG00000036571 7955 + 18:8947554-9030612 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000053125
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000053125 1.823±0.00 0.509±0.18 0.988±0.51 0.013±0.00 0.393±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CW CIL_0003CW_0001 CGP 18:8947554-9172989

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002040 IMP sprouting angiogenesis
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030868 Sema3d-201 protein_coding Mus_musculus 0.0000000003 73

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