C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: interferon regulatory factor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000063562 irf6-201 ENSDARG00000043296 7955 + 22:2340595-2352382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENSDART00000063562
Transcript ID Brain Heart Liver
ENSDART00000063562 0.116±0.04 0.227±0.05 0.812±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000975 IEA regulatory region DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0048702 IMP embryonic neurocranium morphogenesis
GO:0060429 IMP epithelium development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076521 Irf6-001 protein_coding Mus_musculus 0 243
ENSMUST00000138826 Irf6-004 retained_intron Mus_musculus 0 243
ENSMUST00000140066 Irf6-002 retained_intron Mus_musculus 0 243

Loading