C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: clathrin, heavy polypeptide a (Hc)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000063849 cltca-001 ENSDARG00000043493 7955 - 10:28992812-29050694 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000063849
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000063849 27.127±20.38 11.221±10.55 23.476±0.00 7.116±0.00 17.233±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QV CIL_0004QV_0001 CGP 10:28988530-29050694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005488 IEA binding
GO:0005905 IEA coated pit
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030130 IEA clathrin coat of trans-Golgi network vesicle
GO:0030132 IEA clathrin coat of coated pit
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000427926 CLTCL1-001 protein_coding Homo_sapiens 0 2970
ENST00000611723 CLTCL1-006 retained_intron Homo_sapiens 0 316
ENST00000615606 CLTCL1-007 retained_intron Homo_sapiens 0 2499
ENST00000617103 CLTCL1-008 nonsense_mediated_decay Homo_sapiens 0 2218
ENST00000617926 CLTCL1-010 protein_coding Homo_sapiens 0 813
ENST00000621271 CLTCL1-002 protein_coding Homo_sapiens 0 2713
ENST00000622493 CLTCL1-009 protein_coding Homo_sapiens 0 508

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