C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004QV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077339-ENSDARG00000043493 CGP 7955 10:28988530-29050694
GeneTranscriptPositionBiotype
ENSDARG00000043493 (cltca)
clathrin, heavy polypeptide a (Hc) 		ENSDART00000063849 (cltca-001) 28992812-29050694 protein_coding
ENSDART00000136176 (cltca-002) 29002025-29003605 retained_intron
ENSDART00000136864 (cltca-003) 28999198-28999867 retained_intron
ENSDARG00000077339 (ptrh2)
peptidyl-tRNA hydrolase 2 		ENSDART00000114144 (ptrh2-201) 28990157-28991087 protein_coding
ENSDART00000142016 (ptrh2-001) 28988530-28991098 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004QV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000072582-ENSMUSG00000047126 CGP 10090 11:86683985-86757565
GeneTranscriptPositionBiotype
ENSMUSG00000047126 (Cltc)
clathrin, heavy polypeptide (Hc) 		ENSMUST00000060766 (Cltc-006) 86694655-86757501 protein_coding
ENSMUST00000103186 (Cltc-001) 86694351-86757565 protein_coding
ENSMUST00000124385 (Cltc-002) 86695317-86703697 protein_coding
ENSMUST00000133501 (Cltc-004) 86724198-86726452 processed_transcript
ENSMUST00000134999 (Cltc-003) 86700938-86702430 processed_transcript
ENSMUST00000141152 (Cltc-005) 86723278-86726483 retained_intron
ENSMUSG00000072582 (Ptrh2)
peptidyl-tRNA hydrolase 2 		ENSMUST00000108021 (Ptrh2-002) 86683985-86692457 protein_coding
ENSMUST00000108022 (Ptrh2-001) 86683985-86692457 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QV_0001ENSDARG00000043493ENSDART00000063849ENSDART00000136176ENSDART00000136864ENSDARG00000077339ENSDART00000114144ENSDART00000142016CIL_0004QV_0002ENSMUSG00000047126ENSMUST00000060766ENSMUST00000103186ENSMUST00000124385ENSMUST00000133501ENSMUST00000134999ENSMUST00000141152ENSMUSG00000072582ENSMUST00000108021ENSMUST00000108022
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QV_0001ENSDARG00000043493ENSDART00000063849ENSDARG00000077339ENSDART00000114144ENSDART00000142016CIL_0004QV_0002ENSMUSG00000047126ENSMUST00000060766ENSMUST00000103186ENSMUST00000124385ENSMUSG00000072582ENSMUST00000108021ENSMUST00000108022
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043493 ENSDART00000063849 N/A N/A N/A 27.127±20.38 N/A N/A 11.221±10.55 23.476±0.00 7.116±0.00 N/A 17.233±0.00 N/A N/A N/A
ENSDART00000136176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000077339 ENSDART00000114144 N/A N/A N/A 1.233±0.52 N/A N/A 8.878±7.96 4.749±2.80 0.242±0.00 N/A 9.386±0.00 N/A N/A N/A
ENSDART00000142016 N/A N/A N/A 2.134±0.00 N/A N/A 2.370±0.75 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000047126 ENSMUST00000060766 14.431±3.43 55.212±28.04 12.310±3.80 39.113±29.20 27.284±9.47 17.008±7.71 9.429±1.17 19.320±5.66 18.148±4.90 8.247±1.85 5.399±0.00 28.807±14.90 55.840±16.77 9.850±6.70
ENSMUST00000103186 27.387±11.74 49.546±25.24 17.665±0.22 20.671±5.75 36.395±25.54 41.177±18.35 6.159±1.49 24.367±11.09 13.629±3.43 49.881±11.26 4.068±0.28 49.208±19.42 25.383±7.14 12.771±4.32
ENSMUST00000124385 N/A N/A N/A N/A N/A N/A 16.053±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000072582 ENSMUST00000108021 0.270±0.00 N/A N/A N/A N/A 0.497±0.10 0.193±0.00 0.477±0.16 N/A N/A N/A 0.508±0.09 0.387±0.13 0.242±0.00
ENSMUST00000108022 4.209±1.40 9.450±2.66 5.509±0.26 6.281±4.10 3.278±0.57 3.123±0.67 1.950±0.36 3.371±0.51 7.303±3.26 3.174±0.18 2.457±0.11 5.420±1.17 4.252±2.01 2.211±0.48

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