C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: STIP1 homology and U-Box containing protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000066500 stub1-201 ENSDARG00000045228 7955 + 24:41229798-41240423 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSDART00000066500
Transcript ID Liver
ENSDART00000066500 0.457±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0000209 ISS protein polyubiquitination
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0016567 IEA protein ubiquitination
GO:0030544 ISS Hsp70 protein binding
GO:0030579 ISS ubiquitin-dependent SMAD protein catabolic process
GO:0030911 ISS TPR domain binding
GO:0031398 ISS positive regulation of protein ubiquitination
GO:0031943 ISS regulation of glucocorticoid metabolic process
GO:0032436 ISS positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046332 ISS SMAD binding
GO:0051879 ISS Hsp90 protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219548 STUB1-001 protein_coding Homo_sapiens 0 505
ENST00000412368 JMJD8-001 protein_coding Homo_sapiens 8e-32 143
ENST00000564316 STUB1-011 protein_coding Homo_sapiens 0 289
ENST00000564370 STUB1-008 protein_coding Homo_sapiens 0 460
ENST00000565302 JMJD8-002 retained_intron Homo_sapiens 7e-32 143
ENST00000565677 STUB1-002 protein_coding Homo_sapiens 0 460
ENST00000566408 STUB1-010 protein_coding Homo_sapiens 0 276
ENST00000567120 JMJD8-003 retained_intron Homo_sapiens 8e-32 143
ENST00000568313 JMJD8-012 retained_intron Homo_sapiens 4e-32 143
ENST00000568689 JMJD8-004 retained_intron Homo_sapiens 7e-32 143
ENST00000569248 STUB1-003 retained_intron Homo_sapiens 0 318
ENST00000609261 JMJD8-016 protein_coding Homo_sapiens 7e-32 143

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