C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: frizzled homolog 8a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000066835 fzd8a-001 ENSDARG00000045444 7955 - 24:4525355-4527958 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000066835
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000066835 2.587±0.58 1.664±1.03 2.793±1.01 0.485±0.00 0.758±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FP CIL_0006FP_0001 CGP 24:4512247-4527958

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001944 IBA vasculature development
GO:0004871 IEA signal transducer activity
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0005515 IEA protein binding
GO:0005737 IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0007165 IBA signal transduction
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0007409 IBA axonogenesis
GO:0008406 IBA gonad development
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016055 IEA Wnt receptor signaling pathway
GO:0017147 IBA Wnt-protein binding
GO:0021529 IMP spinal cord oligodendrocyte cell differentiation
GO:0021531 IMP spinal cord radial glial cell differentiation
GO:0021879 IMP forebrain neuron differentiation
GO:0030165 IBA PDZ domain binding
GO:0033077 IBA T cell differentiation in thymus
GO:0042813 IEA Wnt-activated receptor activity
GO:0042995 IBA cell projection
GO:0060070 IGI canonical Wnt receptor signaling pathway
GO:0060898 IGI eye field cell fate commitment involved in camera-type eye formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041080 Fzd8-201 protein_coding Mus_musculus 0 340
ENST00000295417 FZD5-001 protein_coding Homo_sapiens 2.8026e-45 189

Loading