C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shaw-related subfamily, member 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000073919 kcnc1b-201 ENSDARG00000032959 7955 + 25:8326839-8359521 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000073919
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000073919 9.599±2.87 0.287±0.15 0.173±0.16 0.139±0.00 0.607±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000418 CIL_000418_0001 CGP 25:8326839-8401506

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005249 IEA voltage-gated potassium channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005267 IEA potassium channel activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006813 IEA potassium ion transport
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IBA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037012 Kcna4-001 protein_coding Mus_musculus 0.000000000000002 90
ENSMUST00000092175 Kcnc2-201 protein_coding Mus_musculus 0 309

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