C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage gated channel, Shaw-related subfamily, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092175 Kcnc2-201 ENSMUSG00000035681 10090 + 10:112271123-112466304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092175
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092175 0.244±0.06 0.240±0.04 0.811±0.39 0.654±0.14 0.210±0.05 0.117±0.02 0.622±0.32 0.012±0.01 0.156±0.08 0.034±0.01 0.607±0.27 0.011±0.01 0.549±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001508 IMP action potential
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0008076 IEA voltage-gated potassium channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000073919 kcnc1b-201 protein_coding Danio_rerio 0 309
ENSDART00000087293 kcnc4-201 protein_coding Danio_rerio 0 209
ENSDART00000146805 kcnc4-001 protein_coding Danio_rerio 0 209
ENST00000265969 KCNC1-002 protein_coding Homo_sapiens 0 250
ENST00000298972 KCNC2-201 protein_coding Homo_sapiens 0 2259
ENST00000350228 KCNC2-004 protein_coding Homo_sapiens 0 1999
ENST00000379472 KCNC1-001 protein_coding Homo_sapiens 0 250
ENST00000393288 KCNC2-002 protein_coding Homo_sapiens 0 2259
ENST00000540018 KCNC2-003 protein_coding Homo_sapiens 0 1999
ENST00000546456 KCNC2-007 processed_transcript Homo_sapiens 0 316
ENST00000548243 KCNC2-008 processed_transcript Homo_sapiens 0 701
ENST00000548513 KCNC2-006 protein_coding Homo_sapiens 0 2259
ENST00000549446 KCNC2-001 protein_coding Homo_sapiens 0 2259
ENST00000550433 KCNC2-005 protein_coding Homo_sapiens 0 2259

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