C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exostoses (multiple) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000079165 ext2-001 ENSDARG00000056648 7955 + 7:27970142-28018481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000079165
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000079165 8.535±6.47 11.734±1.77 3.532±1.18 1.358±0.00 4.471±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V3 CIL_0002V3_0001 CGP 7:27970142-28050432

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IMP skeletal system development
GO:0001503 IMP ossification
GO:0001649 IMP osteoblast differentiation
GO:0006024 IEA glycosaminoglycan biosynthetic process
GO:0008543 IGI fibroblast growth factor receptor signaling pathway
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016021 IEA integral to membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0030166 IMP proteoglycan biosynthetic process
GO:0030198 IMP extracellular matrix organization
GO:0030516 IMP regulation of axon extension
GO:0031227 IEA intrinsic to endoplasmic reticulum membrane
GO:0031290 IMP retinal ganglion cell axon guidance
GO:0033339 IMP pectoral fin development
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0035138 IMP pectoral fin morphogenesis
GO:0042476 IMP odontogenesis
GO:0045743 IMP positive regulation of fibroblast growth factor receptor signaling pathway
GO:0050509 ISS N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity
GO:0050650 IGI chondroitin sulfate proteoglycan biosynthetic process
GO:0051216 IMP cartilage development
GO:0097374 IMP sensory neuron axon guidance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028623 Ext2-001 protein_coding Mus_musculus 0 990
ENSMUST00000125407 Ext2-002 nonsense_mediated_decay Mus_musculus 0 580
ENSMUST00000132429 Ext2-009 protein_coding Mus_musculus 0 226
ENSMUST00000139321 Ext2-010 retained_intron Mus_musculus 0 307

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