C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromodomain helicase DNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000085727 CHD1-201 ENSDARG00000014878 7955 + 10:8523589-8589277 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000085727
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000085727 2.411±2.14 2.087±0.48 1.978±0.16 1.979±0.00 2.520±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024627 Chd1-001 protein_coding Mus_musculus 0 1683
ENSMUST00000173311 Chd1-003 protein_coding Mus_musculus 0 1376
ENSMUST00000174461 Chd1-002 protein_coding Mus_musculus 0 909

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