C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptotagmin XVII
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000085903 SYT17-201 ENSDARG00000060741 7955 - 3:31352981-31380407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000085903
Transcript ID Heart Kidney Muscle
ENSDART00000085903 0.156±0.03 0.091±0.00 0.158±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A1 CIL_0005A1_0001 CGP 3:31352981-31393454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081574 Syt17-201 protein_coding Mus_musculus 0 520
ENST00000355377 SYT17-001 protein_coding Homo_sapiens 0 525
ENST00000562034 SYT17-003 protein_coding Homo_sapiens 0 525
ENST00000562274 SYT17-009 retained_intron Homo_sapiens 0 237
ENST00000562711 SYT17-004 protein_coding Homo_sapiens 0 525
ENST00000568115 SYT17-002 protein_coding Homo_sapiens 0 435

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