C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: citrate synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000103244 cs-001 ENSDARG00000070395 7955 + 23:34121570-34141987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000103244
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000103244 18.893±7.16 130.958±51.17 24.701±16.32 3.246±0.00 83.526±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004108 IEA citrate (Si)-synthase activity
GO:0044262 IEA cellular carbohydrate metabolic process
GO:0046912 IEA transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056085 Csl-201 protein_coding Mus_musculus 0 713
ENST00000351328 CS-001 protein_coding Homo_sapiens 0 806
ENST00000464192 RP11-446H18.1-001 processed_pseudogene Homo_sapiens 0 281
ENST00000542324 CS-003 protein_coding Homo_sapiens 0 802
ENST00000546621 CS-005 retained_intron Homo_sapiens 0 372
ENST00000546891 CS-020 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000546930 CS-032 protein_coding Homo_sapiens 1e-29 134
ENST00000547298 CS-035 protein_coding Homo_sapiens 0 241
ENST00000547449 CS-026 retained_intron Homo_sapiens 3.9937e-43 178
ENST00000547912 CS-022 retained_intron Homo_sapiens 2e-23 113
ENST00000548567 CS-002 protein_coding Homo_sapiens 0 804
ENST00000548849 CS-023 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000549143 CS-008 nonsense_mediated_decay Homo_sapiens 0 782
ENST00000549221 CS-031 protein_coding Homo_sapiens 0 189
ENST00000550655 CS-013 protein_coding Homo_sapiens 0 244
ENST00000550734 CS-018 protein_coding Homo_sapiens 0 259
ENST00000551137 CS-009 protein_coding Homo_sapiens 0 246
ENST00000551253 CS-036 protein_coding Homo_sapiens 0 255
ENST00000551473 CS-011 protein_coding Homo_sapiens 0 244
ENST00000551936 CS-034 protein_coding Homo_sapiens 0 259
ENST00000551968 CS-027 protein_coding Homo_sapiens 2e-27 126
ENST00000552688 CS-030 protein_coding Homo_sapiens 0 206
ENST00000614660 CTB-52I2.4-003 transcribed_processed_pseudogene Homo_sapiens 0 717
ENST00000621646 CTB-52I2.4-002 processed_transcript Homo_sapiens 0 710

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