C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: citrate synthase like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056085 Csl-201 ENSMUSG00000046934 10090 - 10:99757705-99759658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056085
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056085 0.043±0.01 0.033±0.00 0.011±0.01 0.078±0.08 0.046±0.01 0.026±0.02 0.008±0.00 0.034±0.01 0.028±0.00 0.086±0.05 0.036±0.02 66.022±15.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004108 IEA citrate (Si)-synthase activity
GO:0005739 IDA mitochondrion
GO:0006099 IEA tricarboxylic acid cycle
GO:0008150 ND biological_process
GO:0044262 IEA cellular carbohydrate metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123483 cs-201 protein_coding Danio_rerio 0 713
ENSDART00000103244 cs-001 protein_coding Danio_rerio 0 713
ENST00000351328 CS-001 protein_coding Homo_sapiens 0 1705
ENST00000464192 RP11-446H18.1-001 processed_pseudogene Homo_sapiens 0 992
ENST00000542324 CS-003 protein_coding Homo_sapiens 0 1628
ENST00000546585 CS-006 retained_intron Homo_sapiens 0 344
ENST00000546621 CS-005 retained_intron Homo_sapiens 0 780
ENST00000546891 CS-020 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000547298 CS-035 protein_coding Homo_sapiens 0 603
ENST00000547449 CS-026 retained_intron Homo_sapiens 0 455
ENST00000547912 CS-022 retained_intron Homo_sapiens 0 291
ENST00000548041 CS-033 protein_coding Homo_sapiens 0 505
ENST00000548567 CS-002 protein_coding Homo_sapiens 0 1628
ENST00000548746 CS-019 protein_coding Homo_sapiens 0 446
ENST00000548849 CS-023 nonsense_mediated_decay Homo_sapiens 0 791
ENST00000549143 CS-008 nonsense_mediated_decay Homo_sapiens 0 1531
ENST00000549221 CS-031 protein_coding Homo_sapiens 0 455
ENST00000550159 CS-029 protein_coding Homo_sapiens 0 431
ENST00000550655 CS-013 protein_coding Homo_sapiens 0 647
ENST00000550734 CS-018 protein_coding Homo_sapiens 0 647
ENST00000551137 CS-009 protein_coding Homo_sapiens 0 592
ENST00000551253 CS-036 protein_coding Homo_sapiens 0 658
ENST00000551430 CS-010 protein_coding Homo_sapiens 0 425
ENST00000551473 CS-011 protein_coding Homo_sapiens 0 614
ENST00000551936 CS-034 protein_coding Homo_sapiens 0 647
ENST00000551968 CS-027 protein_coding Homo_sapiens 0 220
ENST00000552222 CS-024 nonsense_mediated_decay Homo_sapiens 0 198
ENST00000552688 CS-030 protein_coding Homo_sapiens 0 488
ENST00000614660 CTB-52I2.4-003 transcribed_processed_pseudogene Homo_sapiens 0 1557
ENST00000621646 CTB-52I2.4-002 processed_transcript Homo_sapiens 0 1517

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