C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAB, member RAS oncogene family-like 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113716 rabl6-201 ENSDARG00000079046 7955 - 5:5581498-5638350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000113716
Transcript ID Brain Heart Liver Muscle
ENSDART00000113716 1.590±0.00 0.531±0.00 0.075±0.00 0.269±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QL CIL_0000QL_0001 CGP 5:5493505-5638350

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058137 Rabl6-001 protein_coding Mus_musculus 0 553
ENSMUST00000140635 Rabl6-004 processed_transcript Mus_musculus 0 475
ENSMUST00000140785 Rabl6-005 processed_transcript Mus_musculus 0 209
ENSMUST00000146012 Rabl6-002 processed_transcript Mus_musculus 0 532
ENST00000311502 RABL6-009 protein_coding Homo_sapiens 0 575
ENST00000357466 RABL6-005 protein_coding Homo_sapiens 0 575
ENST00000371663 RABL6-201 protein_coding Homo_sapiens 0 568
ENST00000371671 RABL6-202 protein_coding Homo_sapiens 0 455
ENST00000436380 RABL6-001 protein_coding Homo_sapiens 0 368
ENST00000464941 RABL6-010 nonsense_mediated_decay Homo_sapiens 0 505
ENST00000484471 RABL6-007 nonsense_mediated_decay Homo_sapiens 0 575

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