C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000123270 runx1t1-004 ENSDARG00000003680 7955 + 19:35066408-35137267 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007O2 CIL_0007O2_0005 UCNEbase 19:34653963-35155065
CIL_00015G CIL_00015G_0001 CGP 19:34829362-35150588

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265814 RUNX1T1-201 protein_coding Homo_sapiens 0 616
ENST00000360348 RUNX1T1-009 protein_coding Homo_sapiens 0 616
ENST00000396218 RUNX1T1-002 protein_coding Homo_sapiens 0 617
ENST00000422361 RUNX1T1-004 protein_coding Homo_sapiens 0 616
ENST00000436581 RUNX1T1-202 protein_coding Homo_sapiens 0 616
ENST00000517792 RUNX1T1-038 protein_coding Homo_sapiens 0 307
ENST00000517919 RUNX1T1-019 protein_coding Homo_sapiens 0 246
ENST00000518823 RUNX1T1-029 protein_coding Homo_sapiens 3.00004e-41 172
ENST00000518844 RUNX1T1-010 protein_coding Homo_sapiens 0 617
ENST00000518992 RUNX1T1-042 protein_coding Homo_sapiens 0 470
ENST00000519577 RUNX1T1-015 nonsense_mediated_decay Homo_sapiens 8.00001e-42 174
ENST00000519847 RUNX1T1-018 protein_coding Homo_sapiens 0 339
ENST00000520556 RUNX1T1-041 protein_coding Homo_sapiens 0 233
ENST00000520583 RUNX1T1-025 protein_coding Homo_sapiens 0 215
ENST00000520724 RUNX1T1-011 protein_coding Homo_sapiens 0 616
ENST00000521054 RUNX1T1-040 protein_coding Homo_sapiens 0 425
ENST00000521319 RUNX1T1-032 protein_coding Homo_sapiens 0 231
ENST00000521553 RUNX1T1-006 protein_coding Homo_sapiens 0 479
ENST00000521733 RUNX1T1-039 protein_coding Homo_sapiens 0 235
ENST00000522467 RUNX1T1-017 protein_coding Homo_sapiens 0 300
ENST00000523168 RUNX1T1-016 protein_coding Homo_sapiens 0 215
ENST00000523290 RUNX1T1-005 retained_intron Homo_sapiens 0 396
ENST00000523629 RUNX1T1-001 protein_coding Homo_sapiens 0 616
ENST00000613302 RUNX1T1-203 protein_coding Homo_sapiens 0 616
ENST00000613886 RUNX1T1-204 protein_coding Homo_sapiens 0 617
ENST00000614812 RUNX1T1-205 protein_coding Homo_sapiens 0 616
ENST00000615601 RUNX1T1-206 protein_coding Homo_sapiens 0 614
ENST00000617740 RUNX1T1-207 protein_coding Homo_sapiens 0 616

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