C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003680 runx1t1 7955 + 19:35066232-35150588 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000010294 runx1t1-201 35116636-35147503 protein_coding
  ENSDART00000123270 runx1t1-004 35066408-35137267 protein_coding
  ENSDART00000147226 runx1t1-001 35066232-35150588 protein_coding
  ENSDART00000151192 runx1t1-003 35096862-35120752 protein_coding
  ENSDART00000151521 runx1t1-002 35096836-35130399 nonsense_mediated_decay

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000147226
Transcript ID Heart Kidney Liver Muscle
ENSDART00000147226 0.678±0.25 0.223±0.00 0.052±0.00 0.691±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007O2 CIL_0007O2_0005 UCNEbase 19:34653963-35155065
CIL_00015G CIL_00015G_0001 CGP 19:34829362-35150588

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000079102 RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) protein_coding Homo_sapiens
ENSMUSG00000006586 Runx1t1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) protein_coding Mus_musculus

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