C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 5a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000123877 wnt5a-202 ENSDARG00000014495 7955 + 8:55916769-55927027 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002X CIL_00002X_0001 CGP 8:55873158-56081179
CIL_00002U CIL_00002U_0001 CGP 8:55916769-56081179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005109 IBA frizzled binding
GO:0005576 IEA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0007275 IEA multicellular organismal development
GO:0016055 IEA Wnt receptor signaling pathway
GO:0030182 IBA neuron differentiation
GO:0045165 IBA cell fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264634 WNT5A-201 protein_coding Homo_sapiens 0 507
ENST00000310594 WNT5B-005 protein_coding Homo_sapiens 0 459
ENST00000397196 WNT5B-001 protein_coding Homo_sapiens 0 459
ENST00000474267 WNT5A-001 protein_coding Homo_sapiens 0 507
ENST00000482079 WNT5A-009 protein_coding Homo_sapiens 0 272
ENST00000497027 WNT5A-005 protein_coding Homo_sapiens 0 507
ENST00000497817 WNT5A-008 retained_intron Homo_sapiens 2e-22 110
ENST00000537031 WNT5B-007 protein_coding Homo_sapiens 0 459
ENST00000545747 WNT5B-010 processed_transcript Homo_sapiens 0 219
ENST00000614415 WNT5A-202 protein_coding Homo_sapiens 2e-28 130

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