C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00002U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014495-ENSDARG00000014495 CGP 7955 8:55916769-56081179
GeneTranscriptPositionBiotype
ENSDARG00000006990 (CABZ01112331.1)
Uncharacterized protein 		ENSDART00000020569 (CABZ01112331.1-201) 56072712-56080929 protein_coding
ENSDARG00000014495 (wnt5a)
wingless-type MMTV integration site family, member 5a 		ENSDART00000023675 (wnt5a-201) 55916769-56081179 protein_coding
ENSDART00000123877 (wnt5a-202) 55916769-55927027 protein_coding
ENSDARG00000045204 (CACNA2D3 (1 of 2))
calcium channel, voltage-dependent, alpha 2/delta subunit 3 		ENSDART00000066454 (CACNA2D3 (1 of 2)-201) 55932338-56016475 protein_coding
ENSDARG00000045205 (LRTM1)
leucine-rich repeats and transmembrane domains 1 		ENSDART00000066457 (LRTM1-201) 55946969-55959656 protein_coding
CIL_00002U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021994-ENSMUSG00000021991 CGP 10090 14:28504750-29721864
GeneTranscriptPositionBiotype
ENSMUSG00000021991 (Cacna2d3)
calcium channel, voltage-dependent, alpha2/delta subunit 3 		ENSMUST00000022567 (Cacna2d3-001) 28904943-29721864 protein_coding
ENSMUSG00000021994 (Wnt5a)
wingless-type MMTV integration site family, member 5A 		ENSMUST00000063465 (Wnt5a-001) 28504750-28527447 protein_coding
ENSMUST00000112272 (Wnt5a-002) 28511405-28525434 protein_coding
ENSMUST00000134163 (Wnt5a-003) 28511390-28523517 processed_transcript
ENSMUST00000134766 (Wnt5a-004) 28505900-28509121 processed_transcript
ENSMUST00000146192 (Wnt5a-006) 28511451-28511907 processed_transcript
ENSMUST00000151929 (Wnt5a-005) 28510618-28511925 processed_transcript
ENSMUSG00000045776 (Lrtm1)
leucine-rich repeats and transmembrane domains 1 		ENSMUST00000055662 (Lrtm1-201) 29018208-29033642 protein_coding
ENSMUSG00000075245 (Gm6043)
predicted gene 6043 		ENSMUST00000099961 (Gm6043-201) 29217639-29218130 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002U_0001ENSDARG00000006990ENSDART00000020569ENSDARG00000014495ENSDART00000023675ENSDART00000123877ENSDARG00000045204ENSDART00000066454ENSDARG00000045205ENSDART00000066457CIL_00002U_0002ENSMUSG00000021991ENSMUST00000022567ENSMUSG00000021994ENSMUST00000063465ENSMUST00000112272ENSMUST00000134163ENSMUST00000134766ENSMUST00000146192ENSMUST00000151929ENSMUSG00000045776ENSMUST00000055662ENSMUSG00000075245ENSMUST00000099961
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002U_0001ENSDARG00000006990ENSDART00000020569ENSDARG00000014495ENSDART00000023675ENSDARG00000045204ENSDART00000066454ENSDARG00000045205ENSDART00000066457CIL_00002U_0002ENSMUSG00000021991ENSMUST00000022567ENSMUSG00000021994ENSMUST00000063465ENSMUST00000112272ENSMUST00000134163ENSMUSG00000045776ENSMUST00000055662ENSMUSG00000075245ENSMUST00000099961
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006990 ENSDART00000020569 N/A N/A N/A 6.566±0.00 N/A N/A N/A N/A 0.191±0.00 N/A 0.856±0.00 N/A N/A N/A
ENSDARG00000014495 ENSDART00000023675 N/A N/A N/A N/A N/A N/A 1.766±1.17 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000123877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000045204 ENSDART00000066454 N/A N/A N/A 2.398±0.00 N/A N/A 0.069±0.04 0.242±0.05 N/A N/A N/A N/A N/A N/A
ENSDARG00000045205 ENSDART00000066457 N/A N/A N/A 0.460±0.14 N/A N/A 0.050±0.02 0.070±0.01 0.025±0.00 N/A 9.684±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021991 ENSMUST00000022567 0.345±0.31 0.661±0.12 0.690±0.00 24.559±14.36 0.117±0.07 0.324±0.17 0.219±0.12 0.049±0.02 0.009±0.01 0.156±0.07 0.221±0.10 1.064±0.42 0.510±0.78 0.514±0.09
ENSMUSG00000021994 ENSMUST00000063465 10.198±7.91 15.907±3.14 16.289±0.69 1.989±1.30 4.630±1.95 3.330±0.73 0.851±0.41 2.131±0.54 0.220±0.16 2.970±0.49 0.352±0.11 20.179±9.88 0.319±0.20 0.335±0.17
ENSMUST00000112272 21.523±17.80 N/A 16.611±1.53 2.948±2.04 2.884±0.95 2.634±0.89 2.219±0.23 2.725±0.80 0.151±0.08 2.227±0.17 0.997±0.16 6.989±0.62 0.520±0.23 0.451±0.16
ENSMUST00000134163 3.292±0.03 N/A N/A 0.741±0.00 3.966±0.64 4.054±1.00 N/A N/A 0.245±0.17 N/A N/A 13.657±5.96 0.199±0.04 0.257±0.18
ENSMUST00000134766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045776 ENSMUST00000055662 0.312±0.10 0.091±0.03 0.010±0.00 0.067±0.07 0.824±0.23 0.012±0.00 37.282±4.67 0.097±0.06 1.877±1.82 0.381±0.31 3.978±1.12 0.114±0.04 0.005±0.00 0.042±0.03
ENSMUSG00000075245 ENSMUST00000099961 0.220±0.13 N/A 0.041±0.02 0.125±0.04 N/A N/A N/A N/A 0.051±0.03 N/A 0.150±0.00 0.402±0.22 0.071±0.04 0.089±0.00

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