C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMAD family member 6a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000125131 smad6a-203 ENSDARG00000053209 7955 - 7:35526334-35534911 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000125131
Transcript ID Brain Heart Liver Muscle
ENSDART00000125131 0.996±0.00 2.311±0.00 0.215±0.00 1.445±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007179 IEA transforming growth factor beta receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288840 SMAD6-001 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000557916 SMAD6-002 nonsense_mediated_decay Homo_sapiens 7e-31 139
ENST00000559931 SMAD6-003 nonsense_mediated_decay Homo_sapiens 3e-31 139

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