C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000130491 wnt1-201 ENSDARG00000055554 7955 + 23:27892988-27898495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000130491
Transcript ID Brain Kidney Muscle
ENSDART00000130491 0.989±0.00 0.064±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033L CIL_00033L_0001 CGP 23:27882108-27898691

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005109 IBA frizzled binding
GO:0005576 IEA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0007275 IEA multicellular organismal development
GO:0007399 IEA nervous system development
GO:0016055 IEA Wnt receptor signaling pathway
GO:0021587 IMP cerebellum morphogenesis
GO:0021592 IMP fourth ventricle development
GO:0030154 IEA cell differentiation
GO:0030182 IBA neuron differentiation
GO:0030902 IMP hindbrain development
GO:0030917 IGI midbrain-hindbrain boundary development
GO:0035284 IMP brain segmentation
GO:0045165 IBA cell fate commitment
GO:0060070 IBA canonical Wnt receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361560 WNT8A-001 nonsense_mediated_decay Homo_sapiens 0.00000001 66
ENST00000398754 WNT8A-002 protein_coding Homo_sapiens 0.00000001 66
ENST00000504809 WNT8A-003 protein_coding Homo_sapiens 0.00000001 66
ENST00000506684 WNT8A-004 protein_coding Homo_sapiens 0.00000001 66

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