C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 8A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398754 WNT8A-002 ENSG00000061492 9606 + 5:138084085-138091510 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OW CIL_0005OW_0001 CGP 5:137937960-138092365
CIL_0005OX CIL_0005OX_0001 CGP 5:138083892-138139443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005109 NAS frizzled binding
GO:0005576 TAS:IEA extracellular region
GO:0005578 ISS proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0007275 IEA multicellular organismal development
GO:0014034 ISS neural crest cell fate commitment
GO:0016055 IEA Wnt signaling pathway
GO:0030182 IBA neuron differentiation
GO:0032526 NAS response to retinoic acid
GO:0044324 ISS regulation of transcription involved in anterior/posterior axis specification
GO:0044335 ISS canonical Wnt signaling pathway involved in neural crest cell differentiation
GO:0048018 NAS receptor agonist activity
GO:0060021 IMP palate development
GO:0060070 ISS canonical Wnt signaling pathway
GO:0061317 IEP canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000012426 Wnt8a-201 protein_coding Mus_musculus 0 1002
ENSDART00000130491 wnt1-201 protein_coding Danio_rerio 0.00000001 66
ENSDART00000077931 wnt1-001 protein_coding Danio_rerio 0.00000001 66

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