C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeo box B1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000136415 hoxb1b-001 ENSDARG00000054033 7955 + 12:28712171-28713865 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000136415
Transcript ID Brain Kidney Muscle
ENSDART00000136415 0.194±0.09 1.092±0.24 0.095±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0021575 IMP hindbrain morphogenesis
GO:0030902 IMP hindbrain development
GO:0043565 IEA sequence-specific DNA binding
GO:0071599 IMP otic vesicle development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000964 Hoxa1-001 protein_coding Mus_musculus 1.4013e-45 189
ENSMUST00000120363 Hoxa1-002 protein_coding Mus_musculus 1.4013e-45 189

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