C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: splicing factor, suppressor of white-apricot homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000143113 sfswap-001 ENSDARG00000005980 7955 - 21:13328565-13485520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000143113
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000143113 16.304±9.24 10.259±4.17 2.395±0.00 0.511±0.00 4.060±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0006396 IEA RNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261674 SFSWAP-001 protein_coding Homo_sapiens 2e-35 156
ENST00000535236 SFSWAP-004 retained_intron Homo_sapiens 3e-35 156
ENST00000537164 SFSWAP-008 protein_coding Homo_sapiens 5e-36 156
ENST00000538548 SFSWAP-005 nonsense_mediated_decay Homo_sapiens 1e-35 156
ENST00000541286 SFSWAP-003 protein_coding Homo_sapiens 2e-35 156

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