C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, beta 1b.1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000148633 itgb1b.1-001 ENSDARG00000053232 7955 + 2:43687835-43704034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000148633
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000148633 0.164±0.09 0.691±0.09 2.576±0.00 0.338±0.00 0.254±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0007155 IEA cell adhesion
GO:0007160 IEA cell-matrix adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0008305 IEA integrin complex
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028348 Itgb6-001 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000059888 Itgb6-002 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000112517 Itgb6-003 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000133887 Itgb6-006 processed_transcript Mus_musculus 0.00000001 66
ENSMUST00000151035 Itgb6-007 processed_transcript Mus_musculus 0.000000009 66
ENSMUST00000154764 Itgb6-004 protein_coding Mus_musculus 0.00000002 66

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