C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: isocitrate dehydrogenase 3 (NAD+) beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000149371 idh3b-001 ENSDARG00000044753 7955 + 21:13936948-13952787 protein_coding

Danio rerio EnsemblZv9

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000149371
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000149371 52.709±12.53 121.448±35.51 26.682±3.32 3.573±0.00 28.381±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004449 IEA isocitrate dehydrogenase (NAD+) activity
GO:0006099 IEA tricarboxylic acid cycle
GO:0016491 IEA oxidoreductase activity
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380843 IDH3B-011 protein_coding Homo_sapiens 0 538
ENST00000380851 IDH3B-010 protein_coding Homo_sapiens 0 547
ENST00000466494 IDH3B-004 processed_transcript Homo_sapiens 0 230
ENST00000474315 IDH3B-001 protein_coding Homo_sapiens 0 538
ENST00000477689 IDH3B-003 processed_transcript Homo_sapiens 8e-32 141
ENST00000479376 IDH3B-005 processed_transcript Homo_sapiens 0 217
ENST00000488299 IDH3B-012 retained_intron Homo_sapiens 0 327
ENST00000492240 IDH3B-007 retained_intron Homo_sapiens 0 213
ENST00000613370 IDH3B-201 protein_coding Homo_sapiens 0 527

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