C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: si:dkey-9i5.4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000150312 si:dkey-9i5.4-001 ENSDARG00000096171 7955 - 4:48304486-48318290 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000150312
Transcript ID Brain Heart Kidney Muscle
ENSDART00000150312 4.523±3.05 0.126±0.05 0.184±0.00 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UL CIL_0003UL_0002 CGP 4:48202130-48355822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050595 Zfp454-001 protein_coding Mus_musculus 0.000000000000001 90
ENSMUST00000058804 Zfp612-201 protein_coding Mus_musculus 0.000003 58
ENSMUST00000109131 Zfp454-003 protein_coding Mus_musculus 0.000000000000001 90
ENSMUST00000163301 Zfp454-201 protein_coding Mus_musculus 0.000000000000001 90
ENST00000243914 CTCFL-001 protein_coding Homo_sapiens 0.00006 55
ENST00000371196 CTCFL-003 protein_coding Homo_sapiens 0.00006 55
ENST00000422869 CTCFL-016 protein_coding Homo_sapiens 0.00005 55
ENST00000423479 CTCFL-020 protein_coding Homo_sapiens 0.00004 55
ENST00000426658 CTCFL-017 nonsense_mediated_decay Homo_sapiens 0.00007 55
ENST00000429804 CTCFL-005 protein_coding Homo_sapiens 0.00007 55
ENST00000432255 CTCFL-006 protein_coding Homo_sapiens 0.00005 55
ENST00000433949 CTCFL-021 protein_coding Homo_sapiens 0.00004 55
ENST00000502686 CTCFL-022 protein_coding Homo_sapiens 0.00004 55
ENST00000539382 CTCFL-013 protein_coding Homo_sapiens 0.00004 55
ENST00000608263 CTCFL-019 protein_coding Homo_sapiens 0.00007 55
ENST00000608425 CTCFL-014 protein_coding Homo_sapiens 0.00005 55
ENST00000608440 CTCFL-023 protein_coding Homo_sapiens 0.00005 55
ENST00000608903 CTCFL-015 protein_coding Homo_sapiens 0.00004 55
ENST00000609232 CTCFL-004 protein_coding Homo_sapiens 0.00007 55

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