C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spectrin repeat containing, nuclear envelope family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000154181 syne3-001 ENSDARG00000023237 7955 + 17:15740278-15807985 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000154181
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000154181 1.912±0.34 2.885±0.83 4.377±2.66 0.103±0.00 1.181±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0016021 IEA integral to membrane
GO:0045111 IMP intermediate filament cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334258 SYNE3-005 protein_coding Homo_sapiens 0.000000000004 79
ENST00000554873 SYNE3-004 protein_coding Homo_sapiens 0.000000000003 79
ENST00000557275 SYNE3-001 protein_coding Homo_sapiens 0.00000000001 79

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