C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: speckle-type POZ protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000155353 spop-001 ENSDARG00000038215 7955 - 3:20547488-20779738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000155353
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000155353 4.206±1.88 1.535±0.69 0.862±0.00 0.563±0.00 1.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004N3 CIL_0004N3_0001 CGP 3:20294197-20779739
CIL_0004N2 CIL_0004N2_0001 CGP 3:20547488-20908455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0016567 IEA protein ubiquitination
GO:0016607 IEA nuclear speck
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

No Homologs available.

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