C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: speckle-type POZ protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000038215 spop 7955 - 3:20547488-20779739 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000016612 spop-201 20644491-20779738 protein_coding
  ENSDART00000137125 spop-202 20548346-20566632 protein_coding
  ENSDART00000155353 spop-001 20547488-20779738 protein_coding
  ENSDART00000156713 spop-002 20706923-20779739 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000016612ENSDART00000155353
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000016612 7.177±2.14 3.495±2.30 2.518±2.06 0.289±0.00 2.060±0.00
ENSDART00000155353 4.206±1.88 1.535±0.69 0.862±0.00 0.563±0.00 1.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004N3 CIL_0004N3_0001 CGP 3:20294197-20779739
CIL_0004N2 CIL_0004N2_0001 CGP 3:20547488-20908455

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0016567 IEA protein ubiquitination
GO:0016607 IEA nuclear speck
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000121067 SPOP speckle-type POZ protein protein_coding Homo_sapiens
ENSMUSG00000057522 Spop speckle-type POZ protein protein_coding Mus_musculus

Loading