C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: si:rp71-45k5.4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000155525 si:rp71-45k5.4-201 ENSDARG00000035679 7955 - 19:36553507-36558547 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000155525
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000155525 23.595±10.50 29.039±7.14 45.617±0.00 1.946±0.00 27.191±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005839 IEA proteasome core complex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019773 IEA proteasome core complex, alpha-subunit complex
GO:0051603 IEA proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170836 Psma2-201 protein_coding Mus_musculus 0 481
ENST00000223321 PSMA2-001 protein_coding Homo_sapiens 0 538
ENST00000411875 PSMA2-002 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000433579 PSMA2-002 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000436986 PSMA2-005 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000442788 PSMA2-001 nonsense_mediated_decay Homo_sapiens 0 538
ENST00000445517 PSMA2-006 protein_coding Homo_sapiens 0 359
ENST00000457444 PSMA2-007 nonsense_mediated_decay Homo_sapiens 0 359

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