C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: si:rp71-45k5.4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000156659 si:rp71-45k5.4-202 ENSDARG00000035679 7955 - 19:36554801-36558586 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000156659
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000156659 10.271±1.00 22.352±0.50 15.433±0.00 1.211±0.00 15.704±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005839 IEA proteasome core complex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019773 IEA proteasome core complex, alpha-subunit complex
GO:0051603 IEA proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170836 Psma2-201 protein_coding Mus_musculus 0 424
ENST00000223321 PSMA2-001 protein_coding Homo_sapiens 0 490
ENST00000411875 PSMA2-002 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000433579 PSMA2-002 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000436986 PSMA2-005 nonsense_mediated_decay Homo_sapiens 0 464
ENST00000442788 PSMA2-001 nonsense_mediated_decay Homo_sapiens 0 490
ENST00000445517 PSMA2-006 protein_coding Homo_sapiens 0 303
ENST00000457444 PSMA2-007 nonsense_mediated_decay Homo_sapiens 0 303

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