C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ARP2 actin-related protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000137 Actr2-003 ENSMUSG00000020152 10090 - 11:20062304-20112913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000137 22.972±4.03 13.985±1.13 42.524±3.58 40.934±4.68 24.638±4.75 28.210±3.29 12.622±0.48 26.405±2.72 24.007±7.44 40.635±0.67 7.317±1.03 19.139±4.74 67.715±13.15 4.779±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OI CIL_0000OI_0002 CGP 11:19924375-20112913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005524 IEA ATP binding
GO:0005737 ISO cytoplasm
GO:0005885 IEA Arp2/3 protein complex
GO:0005925 IEA focal adhesion
GO:0005938 IDA cell cortex
GO:0007163 IGI establishment or maintenance of cell polarity
GO:0008356 IGI asymmetric cell division
GO:0016020 IEA membrane
GO:0016344 IGI meiotic chromosome movement towards spindle pole
GO:0016482 IMP cytoplasmic transport
GO:0030036 IMP actin cytoskeleton organization
GO:0030478 IDA actin cap
GO:0033206 IGI meiotic cytokinesis
GO:0034314 IEA Arp2/3 complex-mediated actin nucleation
GO:0042384 ISO cilium assembly
GO:0042995 IEA cell projection
GO:0051015 IEA actin filament binding
GO:0051321 IGI meiotic cell cycle
GO:0051653 IGI spindle localization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260641 ACTR2-001 protein_coding Homo_sapiens 0 1940
ENST00000377982 ACTR2-002 protein_coding Homo_sapiens 0 1871
ENST00000409926 AP000357.4-001 processed_pseudogene Homo_sapiens 0 1341
ENST00000471552 ACTR2-004 processed_transcript Homo_sapiens 0 291
ENST00000476840 ACTR2-003 processed_transcript Homo_sapiens 0 283
ENST00000521432 AC078899.1-001 processed_pseudogene Homo_sapiens 0 1524
ENST00000542850 ACTR2-201 protein_coding Homo_sapiens 0 1600

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