C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ARP2 actin-related protein 2 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260641 ACTR2-001 ENSG00000138071 9606 + 2:65227753-65271253 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260641
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260641 65.135±0.00 60.527±0.00 8.890±0.00 32.703±20.63 30.561±10.90 35.360±8.48 6.788±3.65 23.791±12.73 19.264±0.29 34.282±8.71 7.150±5.33 39.131±19.20 40.837±3.13 25.662±12.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002N3 CIL_0002N3_0002 CGP 2:65227753-65432637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005200 IDA structural constituent of cytoskeleton
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005885 IDA Arp2/3 protein complex
GO:0005925 IDA focal adhesion
GO:0006928 TAS cellular component movement
GO:0015629 TAS actin cytoskeleton
GO:0016020 IDA membrane
GO:0034314 IDA Arp2/3 complex-mediated actin nucleation
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042384 IMP cilium assembly
GO:0042995 IEA cell projection
GO:0045087 TAS innate immune response
GO:0051015 IDA actin filament binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000137 Actr2-003 protein_coding Mus_musculus 0 1940
ENSMUST00000132022 Actr2-002 processed_transcript Mus_musculus 0 1048
ENSMUST00000134779 Actr2-001 retained_intron Mus_musculus 0 285

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